Season 2 kicks off with Martin Odum hiding out in present-day London and searching for clues about his identity with help from a CIA agent (Kelly Overton). Elsewhere, an investigation is launched into a Russian gangster.

Martin makes contact with a woman who may be linked to his past. Meanwhile, Dmitry embarks on a mission in 2001 Prague to find a wanted war criminal, yet concerns rise that Dmitry may be going too far with his infiltration techniques.

Martin races against time in a search for Kate in Paris. Meanwhile, Dmitry discovers a key to getting close to Doku Zakayev in 2001 Prague, and Ballard gets swept up in a life-changing incident in 1991 Lithuania.

Kate becomes a fugitive in modern-day Paris, so Martin puts her into hiding. Meanwhile, Ballard unearths information that could lead him to Martin, and Ilyana asks Dmitry for a dangerous favor in 2001 Prague.

Kate is offered a deal by Nina and an M16 agent in modern-day Paris, to Martin's chagrin. Meanwhile, Ballard convinces the FBI to allow him to take down Martin; Ilyana is enlisted as an operative in 2001 Prague; and Terrence's secrets emerge.

Martin prepares Kate for a perilous mission in present-day Paris. Meanwhile, Gabi confronts intelligence agents in Prague; a vulnerability in Dmitry is discovered; and Alex is recruited for a distinguished position.

Kate goes missing in present-day Prague. Also, Martin makes a risky proposition; Gabi learns that Blazek may have dangerous ties to Tamir; Dmitry is threatened in 2001 Prague; and suspicions rise about Terrence.

Martin works for Tamir in present-day Prague. Meanwhile, Gabi confronts Blazek about his shadowy activity; Kate is held prisoner in the president's compound in Chechnya; and suspicions rise about Dmitry and Ilyana.

A threat on a summit is investigated by Martin and Nina, who search for Tamir's associate in present-day Prague. Elsewhere, two assassins spin a deadly plan into motion; Tamir's wife gives orders to Beslan; and Dmitry struggles to complete his mission.

Martin makes a deal with the Russians to rescue Kate. Gabi struggles to make a decision about her husband. In 2004, Dmitry asks one last favor of Terrance. In 1972, the last pieces of the puzzle to understanding Martin Odum's identity are revealed.